Workshop Mathematical Systems Biology of Cancer II

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Oct 26, 2007
Friday

09:45 AM - 10:30 AM		A Comparison of Affymetrix Gene Expression Arrays Mark Robinson
Location -- Video -- Abstract Affymetrix has created a new generation of expression chips, based on placing probes across the entire length of a transcript. This includes the Exon arrays and the newer Gene arrays. In this talk, I will discuss a performance comparison of gene-level expression summaries using publicly available data from a tissue experiment and a designed mixture experiment. We make comparisons of the 3 platforms in terms of the coverage of expressed content, reproducibility and detection rates. Supplements -- Show Detail